ISH Data :: Allen Brain Atlas: Human Brain

Gene Search Neurotransmitter Study Cortex Study Subcortex Study Schizophrenia Study Autism Study	Enter Gene Name, Gene Symbol or Entrez Gene ID
	Search Show exact matches only Gene Category Select Gene Category Alzheimer disease Alzheimer disease amyloid secretase pathway Alzheimer disease presenilin pathway Anion channel Autism Cadherin signaling pathway Calcium channel Calcium-mediated signaling Cyclic nucleotide-gated ion channel Depression EGF receptor signaling pathway Epilepsy FGF signaling pathway GABA receptor G-protein coupled receptor Hedgehog signaling pathway Huntington disease Hypoxia response via HIF activation Inflammation mediated by chemokine and cytokine signaling pathway Ion channel activity Ligand-gated ion channel activity MAPKKK cascade Intellectual Disability Microcephaly Nervous system development Neurodegenerative Neurological system process Neurotransmitter secretion NF-kappaB Cascade Notch signaling pathway Oxidative stress response Parkinson disease PDGF signaling pathway Potassium channel Schizophrenia associated Seizure Sodium channel Stress response TGF-beta signaling pathway Transcription factor Wnt signaling pathway close X

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Allen Human Brain Atlas

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Use Gene Search to find data for a specific gene of interest from all ISH datasets

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About the ISH data

High-resolution in situ hybridization image data covering selected genes in specific brain regions

Neurotransmitter Study: 176 genes across cortical regions and 88 genes across subcortical regions in 4 control cases
Cortex Study: 1,000 genes in visual and temporal cortices in multiple adult control brains
Subcortex Study: 55 genes across subcortical regions and 10 additional genes in hypothalamus in one male and one female donor
Schizophrenia Study: 60 genes in dorsolateral prefrontal cortex of over 50 control and schizophrenia cases
Autism Study: 25 genes in frontal, temporal and occipital cortical regions of 11 control and 11 autism cases

About the Allen Human Brain Atlas

A unique multimodal atlas of the human brain, integrating anatomic and genomic information

Microarray data providing an "all genes, all structures" survey in multiple adult control brains
In situ hybridization image data comprising multiple datasets from disease and control cases
MRI data for brains used for all microarray and some ISH analyses
Brain Explorer® 3-D viewer

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